Available software

Name Version Hosts Location Maintainer
amber
(with ambertools)
18 all /opt/apps/amber18/* JL
amber
(with ambertools)
20 all /opt/apps/amber20/* JL
blast-legacy 2.2.9 all /opt/apps/blast-legacy/bin/* JL
cd-hit 4.8.1 all /opt/apps/cd-hit JL
ccmpred 688e4ba all /opt/apps/CCMpred/bin/ccmpred JL
clustalomega 1.2.4 all /opt/apps/clustalo/clustalo-1.2.4 JL
dssp 3.1.4 all /opt/apps/dssp-3.1.4/mkdssp
Binary erroneously shows version 3.1.2
JL
dssp 2.3.0 all /opt/apps/dssp-2.3.0/mkdssp
This version works with Socket
JL
hh-suite 3.3.0 all /opt/apps/hh-suite/bin/* JL
hmmer 3.3.2 all /opt/apps/hmmer-3.3.2/* JL
mafft 7.490 all /opt/apps/mafft/bin/* JL
master 1.5.1 all /opt/apps/master/bin/* JL
maxcluster 0.6.6 all /opt/apps//maxcluster/maxcluster64bit JL
mmseqs2 9-d36de all /opt/apps/MMseqs2/bin/* JL
modeller 9.2.5 all mod9.25 (in $PATH) SDH
muscle 3.8.31 all /opt/apps/muscle/muscle3.8.31 JL
ncbi-blast 2.9.0 all /opt/apps/ncbi-blast+/bin/* JL
ont-guppy 6.0.1+652ffd1 edi0[1-8] /opt/apps/ont-guppy/bin/* JL
pd2_public 5b84579 all /opt/apps/pd2_public JL
pymol 2.3.0 all /opt/apps/pymol/bin/pymol JL
rosetta 3.10 all /opt/apps/rosetta-3.10/main/source/bin/* JL
rosetta 3.12 all /opt/apps/rosetta-3.12/main/source/bin/* JL
socket 3.03 all /opt/apps/socket/socket JL
socket2 all all /opt/apps/socket2/socket2
Binary erroneously shows version 3.02
JL